Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
GABRA4P48169 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GABRA4P48169 AC005229.1-201ENST00000392885 409 ntBASIC14.74□□□□□ -0.05
GABRA4P48169 AC092933.1-201ENST00000393644 945 ntBASIC14.74□□□□□ -0.05
GABRA4P48169 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.74□□□□□ -0.05
GABRA4P48169 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.74□□□□□ -0.05
GABRA4P48169 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.74□□□□□ -0.05
GABRA4P48169 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.74□□□□□ -0.05
GABRA4P48169 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 AP001582.1-201ENST00000525856 295 ntBASIC14.74□□□□□ -0.05
GABRA4P48169 SNX29P1-201ENST00000548357 1007 ntBASIC14.74□□□□□ -0.05
GABRA4P48169 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.74□□□□□ -0.05
GABRA4P48169 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.74□□□□□ -0.05
GABRA4P48169 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.74□□□□□ -0.05
GABRA4P48169 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GABRA4P48169 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
GABRA4P48169 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GABRA4P48169 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 AC093525.8-201ENST00000624099 1342 ntBASIC14.73□□□□□ -0.05
GABRA4P48169 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 ANKRD19P-201ENST00000338192 862 ntBASIC14.73□□□□□ -0.05
GABRA4P48169 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 MIR1909-201ENST00000411312 80 ntBASIC14.73□□□□□ -0.05
GABRA4P48169 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 AC022210.1-201ENST00000449856 793 ntBASIC14.73□□□□□ -0.05
GABRA4P48169 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.73□□□□□ -0.05
GABRA4P48169 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.73□□□□□ -0.05
GABRA4P48169 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.73□□□□□ -0.05
GABRA4P48169 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.73□□□□□ -0.05
GABRA4P48169 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.73□□□□□ -0.05
GABRA4P48169 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GABRA4P48169 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GABRA4P48169 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
GABRA4P48169 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 AC090616.6-203ENST00000579186 1945 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 AC134312.5-201ENST00000568031 1313 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms