Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN2CP42773 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN2CP42773 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN2CP42773 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN2CP42773 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CDKN2CP42773 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKN2CP42773 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 AC067930.6-201ENST00000623257 4947 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CDKN2CP42773 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKN2CP42773 AC126755.1-201ENST00000525846 6405 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 AL022342.1-201ENST00000400363 863 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 AL353705.2-201ENST00000428243 662 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKN2CP42773 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKN2CP42773 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CDKN2CP42773 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKN2CP42773 AL671883.3-201ENST00000603274 991 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 AC018529.1-201ENST00000613063 361 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKN2CP42773 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CDKN2CP42773 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKN2CP42773 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKN2CP42773 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 AC084364.1-201ENST00000551967 1556 ntBASIC14.81□□□□□ -0.04
CDKN2CP42773 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN2CP42773 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDKN2CP42773 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 AC007292.2-201ENST00000593524 1812 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKN2CP42773 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 AC026748.1-201ENST00000624349 3251 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 KRT18P32-201ENST00000424695 1287 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 GPS2P2-201ENST00000430745 888 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKN2CP42773 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDKN2CP42773 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDKN2CP42773 AL133215.2-201ENST00000609242 977 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 MROH4P-201ENST00000431302 1578 ntBASIC14.8□□□□□ -0.04
CDKN2CP42773 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKN2CP42773 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKN2CP42773 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKN2CP42773 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms