Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC1P35251 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 AL158211.3-201ENST00000607385 239 ntBASIC16.52■□□□□ 0.24
RFC1P35251 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC1P35251 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC1P35251 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC1P35251 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RFC1P35251 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.52■□□□□ 0.23
RFC1P35251 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
RFC1P35251 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC1P35251 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.52■□□□□ 0.23
RFC1P35251 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC1P35251 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC1P35251 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 AC087499.5-201ENST00000452760 1342 ntBASIC16.51■□□□□ 0.23
RFC1P35251 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RFC1P35251 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 KRT18P64-201ENST00000434946 1219 ntBASIC16.51■□□□□ 0.23
RFC1P35251 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.51■□□□□ 0.23
RFC1P35251 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC1P35251 RN7SL618P-201ENST00000477850 296 ntBASIC16.51■□□□□ 0.23
RFC1P35251 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.51■□□□□ 0.23
RFC1P35251 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.51■□□□□ 0.23
RFC1P35251 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 AL844908.2-201ENST00000609461 460 ntBASIC16.51■□□□□ 0.23
RFC1P35251 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 AL590560.3-201ENST00000623350 461 ntBASIC16.51■□□□□ 0.23
RFC1P35251 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 AC100757.3-201ENST00000622361 1406 ntBASIC16.51■□□□□ 0.23
RFC1P35251 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 AC006486.2-201ENST00000624246 2199 ntBASIC16.51■□□□□ 0.23
RFC1P35251 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC1P35251 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC1P35251 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFC1P35251 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.5■□□□□ 0.23
RFC1P35251 AL645939.2-201ENST00000427340 991 ntBASIC16.5■□□□□ 0.23
RFC1P35251 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.5■□□□□ 0.23
RFC1P35251 AF228730.6-201ENST00000641497 218 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms