Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.7■□□□□ 0.9
USP6P35125 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.7■□□□□ 0.9
USP6P35125 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 AC079328.2-201ENST00000561241 3354 ntBASIC20.7■□□□□ 0.9
USP6P35125 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP6P35125 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.7■□□□□ 0.9
USP6P35125 PRORSD1P-202ENST00000563365 2154 ntBASIC20.7■□□□□ 0.9
USP6P35125 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP6P35125 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 MIR4683-201ENST00000579659 81 ntBASIC20.7■□□□□ 0.9
USP6P35125 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 AL358472.3-201ENST00000608147 415 ntBASIC20.7■□□□□ 0.9
USP6P35125 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
USP6P35125 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.7■□□□□ 0.9
USP6P35125 REXO1L4P-201ENST00000605109 1937 ntBASIC20.69■□□□□ 0.9
USP6P35125 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP6P35125 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP6P35125 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6P35125 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.69■□□□□ 0.9
USP6P35125 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6P35125 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.69■□□□□ 0.9
USP6P35125 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP6P35125 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP6P35125 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.69■□□□□ 0.9
USP6P35125 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6P35125 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.69■□□□□ 0.9
USP6P35125 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6P35125 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
USP6P35125 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6P35125 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 DPM3-202ENST00000368399 517 ntBASIC20.68■□□□□ 0.9
USP6P35125 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.68■□□□□ 0.9
USP6P35125 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.68■□□□□ 0.9
USP6P35125 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6P35125 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.68■□□□□ 0.9
USP6P35125 AC009955.4-201ENST00000597192 544 ntBASIC20.68■□□□□ 0.9
USP6P35125 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
USP6P35125 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP6P35125 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6P35125 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6P35125 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
USP6P35125 KRT8P29-201ENST00000420409 1371 ntBASIC20.68■□□□□ 0.9
USP6P35125 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6P35125 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP6P35125 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 BCL2-203ENST00000589955 5011 ntBASIC20.67■□□□□ 0.9
USP6P35125 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6P35125 AL360270.3-201ENST00000609118 1348 ntBASIC20.67■□□□□ 0.9
USP6P35125 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6P35125 CICP13-201ENST00000422015 2789 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms