Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.57□□□□□ -0.56
CKS2P33552 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS2P33552 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS2P33552 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS2P33552 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS2P33552 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 TPSP2-201ENST00000561760 610 ntBASIC11.57□□□□□ -0.56
CKS2P33552 AL591684.3-201ENST00000605187 298 ntBASIC11.57□□□□□ -0.56
CKS2P33552 GGTLC5P-201ENST00000617623 998 ntBASIC11.57□□□□□ -0.56
CKS2P33552 AC004706.3-202ENST00000621574 984 ntBASIC11.57□□□□□ -0.56
CKS2P33552 AC133561.5-201ENST00000635547 218 ntBASIC11.57□□□□□ -0.56
CKS2P33552 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS2P33552 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS2P33552 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS2P33552 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 AC010327.5-201ENST00000586923 3061 ntBASIC11.56□□□□□ -0.56
CKS2P33552 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.56□□□□□ -0.56
CKS2P33552 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 AL645939.2-201ENST00000427340 991 ntBASIC11.56□□□□□ -0.56
CKS2P33552 AC093724.1-201ENST00000448659 1027 ntBASIC11.56□□□□□ -0.56
CKS2P33552 TSSC2-201ENST00000450217 709 ntBASIC11.56□□□□□ -0.56
CKS2P33552 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms