Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC6A4P31645 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC6A4P31645 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 GK-202ENST00000378941 458 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC6A4P31645 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC6A4P31645 TDH-203ENST00000531764 1110 ntBASIC15.97■□□□□ 0.15
SLC6A4P31645 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 AC093813.1-201ENST00000605066 256 ntBASIC15.97■□□□□ 0.15
SLC6A4P31645 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A4P31645 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC6A4P31645 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A4P31645 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A4P31645 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC6A4P31645 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A4P31645 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC6A4P31645 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC6A4P31645 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 AC112492.5-201ENST00000421897 457 ntBASIC15.96■□□□□ 0.15
SLC6A4P31645 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A4P31645 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 AP001582.1-201ENST00000525856 295 ntBASIC15.96■□□□□ 0.15
SLC6A4P31645 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC6A4P31645 HILS1-202ENST00000545329 423 ntBASIC15.96■□□□□ 0.15
SLC6A4P31645 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A4P31645 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A4P31645 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A4P31645 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
SLC6A4P31645 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A4P31645 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 AL138799.1-201ENST00000448213 1675 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 OR8S1-201ENST00000310194 1080 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 AC093433.1-201ENST00000458048 571 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms