Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
HOXC8P31273 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HOXC8P31273 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.77■□□□□ 0.28
HOXC8P31273 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HOXC8P31273 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HOXC8P31273 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HOXC8P31273 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 AC005077.2-201ENST00000449786 690 ntBASIC16.77■□□□□ 0.28
HOXC8P31273 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 AC100850.1-201ENST00000506768 649 ntBASIC16.77■□□□□ 0.28
HOXC8P31273 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 AL021578.1-201ENST00000613646 709 ntBASIC16.77■□□□□ 0.28
HOXC8P31273 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HOXC8P31273 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC8P31273 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HOXC8P31273 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC8P31273 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
HOXC8P31273 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.77■□□□□ 0.27
HOXC8P31273 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC8P31273 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.77■□□□□ 0.27
HOXC8P31273 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC8P31273 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.77■□□□□ 0.27
HOXC8P31273 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC8P31273 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
HOXC8P31273 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC8P31273 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 KRT8P4-201ENST00000509735 1454 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 SERPINA13P-202ENST00000478994 924 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXC8P31273 AC026434.2-201ENST00000506094 1078 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 AC005730.2-201ENST00000564549 1184 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 AC007663.3-201ENST00000609632 465 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 AC022748.3-201ENST00000621828 275 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC8P31273 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HOXC8P31273 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 REXO1L5P-201ENST00000622260 2098 ntBASIC16.76■□□□□ 0.27
HOXC8P31273 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HOXC8P31273 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC8P31273 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms