Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BCKDHBP21953 CYP46A4P-201ENST00000414953 267 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.32■□□□□ 0.04
BCKDHBP21953 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.32■□□□□ 0.04
BCKDHBP21953 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 MIR3619-201ENST00000579667 83 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.32■□□□□ 0.04
BCKDHBP21953 ENPP7P14-201ENST00000621765 1040 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 AC084018.2-201ENST00000613093 2607 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BCKDHBP21953 FER1L4-210ENST00000615531 5998 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 LRRC59-203ENST00000576448 1531 ntBASIC15.32■□□□□ 0.04
BCKDHBP21953 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 FXNP2-201ENST00000411625 547 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 HINT2P1-201ENST00000419438 481 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 AC016700.1-201ENST00000429424 312 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 NKAIN1P1-201ENST00000435754 582 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.31■□□□□ 0.04
BCKDHBP21953 IMP3P2-201ENST00000489760 475 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 AC044849.1-201ENST00000519737 1188 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.31■□□□□ 0.04
BCKDHBP21953 AC097724.1-201ENST00000609581 426 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BCKDHBP21953 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BCKDHBP21953 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
BCKDHBP21953 AGGF1P2-201ENST00000426656 2106 ntBASIC15.31■□□□□ 0.04
BCKDHBP21953 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDHBP21953 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
BCKDHBP21953 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
BCKDHBP21953 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 AC079178.1-201ENST00000420915 656 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms