Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLTAP09496 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLTAP09496 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CLTAP09496 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLTAP09496 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.15■□□□□ 0.34
CLTAP09496 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.15■□□□□ 0.34
CLTAP09496 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLTAP09496 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.15■□□□□ 0.34
CLTAP09496 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLTAP09496 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLTAP09496 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.14■□□□□ 0.34
CLTAP09496 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLTAP09496 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.14■□□□□ 0.33
CLTAP09496 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.14■□□□□ 0.33
CLTAP09496 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CLTAP09496 RRP7BP-205ENST00000566851 833 ntBASIC17.14■□□□□ 0.33
CLTAP09496 TP53TG3HP-202ENST00000569755 579 ntBASIC17.14■□□□□ 0.33
CLTAP09496 AC027307.3-201ENST00000594262 1100 ntBASIC17.14■□□□□ 0.33
CLTAP09496 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.14■□□□□ 0.33
CLTAP09496 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.14■□□□□ 0.33
CLTAP09496 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.14■□□□□ 0.33
CLTAP09496 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.14■□□□□ 0.33
CLTAP09496 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLTAP09496 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLTAP09496 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 PRAL-201ENST00000624952 3286 ntBASIC17.13■□□□□ 0.33
CLTAP09496 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 AP003680.1-201ENST00000598970 3660 ntBASIC17.13■□□□□ 0.33
CLTAP09496 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.13■□□□□ 0.33
CLTAP09496 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.13■□□□□ 0.33
CLTAP09496 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.13■□□□□ 0.33
CLTAP09496 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 AC140912.1-201ENST00000577171 1054 ntBASIC17.13■□□□□ 0.33
CLTAP09496 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CLTAP09496 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.13■□□□□ 0.33
CLTAP09496 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
CLTAP09496 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.13■□□□□ 0.33
CLTAP09496 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLTAP09496 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 AC138969.3-201ENST00000546612 1459 ntBASIC17.12■□□□□ 0.33
CLTAP09496 AC138932.2-201ENST00000548268 1459 ntBASIC17.12■□□□□ 0.33
CLTAP09496 AC126755.4-201ENST00000549796 1459 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms