Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 RPS2P1-201ENST00000434010 821 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 AC093724.1-201ENST00000448659 1027 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-AP01891 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-AP01891 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 AL121894.2-201ENST00000602977 491 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC025062.2-201ENST00000605477 670 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 AC010327.5-201ENST00000586923 3061 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 RNPS1P1-201ENST00000507437 918 ntBASIC13.28□□□□□ -0.28
HLA-AP01891 AC073648.2-201ENST00000510116 352 ntBASIC13.28□□□□□ -0.28
HLA-AP01891 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HLA-AP01891 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-AP01891 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 AL805961.1-202ENST00000641562 540 ntBASIC13.28□□□□□ -0.28
HLA-AP01891 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.28□□□□□ -0.28
HLA-AP01891 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-AP01891 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-AP01891 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-AP01891 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms