Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 NME2P1-201ENST00000426182 414 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.91■□□□□ 0.3
EXTL3O43909 MYCLP2-201ENST00000449268 967 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.91■□□□□ 0.3
EXTL3O43909 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
EXTL3O43909 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.91■□□□□ 0.3
EXTL3O43909 TP53TG3HP-202ENST00000569755 579 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 BRI3BPP1-201ENST00000594224 787 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 AC008494.3-201ENST00000606615 944 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.91■□□□□ 0.3
EXTL3O43909 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.91■□□□□ 0.3
EXTL3O43909 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.91■□□□□ 0.3
EXTL3O43909 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
EXTL3O43909 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 C18orf15-201ENST00000623680 2534 ntBASIC16.91■□□□□ 0.3
EXTL3O43909 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 OR8S1-201ENST00000310194 1080 ntBASIC16.9■□□□□ 0.3
EXTL3O43909 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 RN7SL692P-201ENST00000464677 288 ntBASIC16.9■□□□□ 0.3
EXTL3O43909 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 AC092552.1-201ENST00000547243 906 ntBASIC16.9■□□□□ 0.3
EXTL3O43909 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 AL049840.4-201ENST00000602422 811 ntBASIC16.9■□□□□ 0.3
EXTL3O43909 TMEM261P1-201ENST00000604899 340 ntBASIC16.9■□□□□ 0.3
EXTL3O43909 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.9■□□□□ 0.3
EXTL3O43909 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.9■□□□□ 0.3
EXTL3O43909 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXTL3O43909 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EXTL3O43909 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
EXTL3O43909 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EXTL3O43909 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EXTL3O43909 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
EXTL3O43909 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.89■□□□□ 0.29
EXTL3O43909 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EXTL3O43909 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.89■□□□□ 0.29
EXTL3O43909 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EXTL3O43909 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXTL3O43909 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms