Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AL139010.1-201ENST00000454878 894 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC093004.1-201ENST00000508850 424 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC044860.1-202ENST00000559481 777 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC017083.2-201ENST00000608069 979 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC007431.3-201ENST00000623221 587 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AC007950.2-201ENST00000615045 2347 ntBASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FNDC3AQ9Y2H6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AC079776.1-201ENST00000401540 1152 ntBASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MIR1909-201ENST00000411312 80 ntBASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 ACA64.2-201ENST00000459014 129 ntBASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AC243562.2-201ENST00000561247 970 ntBASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNDC3AQ9Y2H6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FNDC3AQ9Y2H6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms