Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AC005357.2-202ENST00000590507 1060 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AC020922.3-201ENST00000595064 547 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AC073413.1-201ENST00000603927 732 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 AL603756.1-201ENST00000606511 2163 ntBASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 FGFR3P1-201ENST00000449999 601 ntBASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.73■□□□□ 0.59
ZC3H4Q9UPT8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 HLA-A-202ENST00000376806 1854 ntBASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 HIST2H2BB-201ENST00000449108 381 ntBASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 AC021723.1-201ENST00000486306 515 ntBASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 AC103988.2-201ENST00000561804 725 ntBASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.72■□□□□ 0.59
ZC3H4Q9UPT8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms