Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 CHCHD2P3-201ENST00000603038 451 ntBASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AL109954.1-202ENST00000564051 2148 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AC138035.3-201ENST00000622706 2791 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AC087499.6-201ENST00000411576 835 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AC093726.1-201ENST00000608064 963 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AL662799.1-202ENST00000614205 422 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AC126365.1-201ENST00000578585 1514 ntBASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHA4Q9UN74 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHA4Q9UN74 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms