Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
EBF1Q9UH73 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.97■□□□□ 0.15
EBF1Q9UH73 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EBF1Q9UH73 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 SOCS2P1-201ENST00000417727 557 ntBASIC15.96■□□□□ 0.15
EBF1Q9UH73 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 BCRP2-202ENST00000447763 634 ntBASIC15.96■□□□□ 0.15
EBF1Q9UH73 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 BCRP6-201ENST00000510112 632 ntBASIC15.96■□□□□ 0.15
EBF1Q9UH73 BCRP7-201ENST00000511549 544 ntBASIC15.96■□□□□ 0.15
EBF1Q9UH73 AC068587.3-201ENST00000526613 355 ntBASIC15.96■□□□□ 0.15
EBF1Q9UH73 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EBF1Q9UH73 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.96■□□□□ 0.15
EBF1Q9UH73 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
EBF1Q9UH73 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EBF1Q9UH73 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC099063.4-201ENST00000641099 1602 ntBASIC15.95■□□□□ 0.14
EBF1Q9UH73 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC092933.1-201ENST00000393644 945 ntBASIC15.95■□□□□ 0.14
EBF1Q9UH73 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC124283.3-201ENST00000570869 594 ntBASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
EBF1Q9UH73 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EBF1Q9UH73 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms