Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC090616.6-203ENST00000579186 1945 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AC008894.3-201ENST00000624324 3103 ntBASIC17.52■□□□□ 0.4
COL20A1Q9P218 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AL158070.2-201ENST00000623713 1621 ntBASIC17.52■□□□□ 0.4
COL20A1Q9P218 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 C2orf27AP3-201ENST00000434123 579 ntBASIC17.52■□□□□ 0.4
COL20A1Q9P218 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.52■□□□□ 0.4
COL20A1Q9P218 AL354718.3-201ENST00000616414 581 ntBASIC17.52■□□□□ 0.4
COL20A1Q9P218 CR382287.1-201ENST00000623954 586 ntBASIC17.52■□□□□ 0.4
COL20A1Q9P218 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL20A1Q9P218 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
COL20A1Q9P218 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
COL20A1Q9P218 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
COL20A1Q9P218 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
COL20A1Q9P218 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 RNA5SP412-201ENST00000516234 123 ntBASIC17.51■□□□□ 0.39
COL20A1Q9P218 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 MIR4538-201ENST00000581377 78 ntBASIC17.51■□□□□ 0.39
COL20A1Q9P218 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL20A1Q9P218 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.51■□□□□ 0.39
COL20A1Q9P218 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 AC006001.1-201ENST00000325130 474 ntBASIC17.5■□□□□ 0.39
COL20A1Q9P218 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL20A1Q9P218 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL20A1Q9P218 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms