Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC112504.1-201ENST00000623415 1841 ntBASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 TPM3P8-201ENST00000330554 643 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AC104982.3-201ENST00000581995 514 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 EEF1DP1-201ENST00000585891 896 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 AL096828.3-201ENST00000615354 462 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 LRRC59-203ENST00000576448 1531 ntBASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1R1Q9NWW0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1R1Q9NWW0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1R1Q9NWW0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
HCFC1R1Q9NWW0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HCFC1R1Q9NWW0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 AC006449.5-201ENST00000610658 2098 ntBASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 CD8B2-202ENST00000417670 633 ntBASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1R1Q9NWW0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 1160.2 ms