Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNF216Q9NWF9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 RN7SKP230-201ENST00000365642 335 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 Y_RNA.436-201ENST00000384097 102 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 MIR1302-8-201ENST00000408342 128 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 IGLL3P-201ENST00000412472 434 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC020898.1-201ENST00000474167 787 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ALG1L5P-201ENST00000482043 771 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC010625.1-201ENST00000511296 403 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 IGHV1-17-201ENST00000520119 334 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 KRT19P2-202ENST00000557173 1012 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC068135.2-201ENST00000569293 1028 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC010620.1-201ENST00000601088 1102 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 RPP40P2-201ENST00000603596 712 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AL161645.1-201ENST00000622716 1255 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AL138955.1-201ENST00000622881 1040 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 AL122018.1-201ENST00000446607 2310 ntBASIC18.8■□□□□ 0.6
RNF216Q9NWF9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF216Q9NWF9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC060834.1-201ENST00000443027 2032 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 ELOCP11-201ENST00000436690 332 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 METTL21AP1-201ENST00000438852 635 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 MTCO3P43-201ENST00000440974 771 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 ELOCP16-201ENST00000444494 332 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC107304.1-201ENST00000604229 296 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC079395.3-201ENST00000615161 484 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 AC010435.1-201ENST00000623353 1177 ntBASIC18.79■□□□□ 0.6
RNF216Q9NWF9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms