Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 BICD1-207ENST00000551848 1962 ntBASIC14.2□□□□□ -0.14
CHD8Q9HCK8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 INE2-201ENST00000630399 1874 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AL592424.1-201ENST00000563624 1536 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AL929302.1-201ENST00000426556 871 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 MIR5001-201ENST00000580185 100 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AC067852.2-201ENST00000590513 2313 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 MIR566-201ENST00000385187 94 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 AP005264.6-204ENST00000588436 719 ntBASIC14.19□□□□□ -0.14
CHD8Q9HCK8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHD8Q9HCK8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AL158070.2-201ENST00000623713 1621 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AC022188.1-201ENST00000620960 1664 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 NHP2P1-201ENST00000335274 462 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 MIR3180-2-201ENST00000581748 88 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AL450472.2-201ENST00000603663 1156 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 BX088651.3-201ENST00000418155 352 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AL592076.1-201ENST00000424448 303 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 MIR6769A-201ENST00000617340 73 ntBASIC14.18□□□□□ -0.14
CHD8Q9HCK8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CHD8Q9HCK8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AL672207.1-201ENST00000328462 1570 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AF274858.1-201ENST00000406288 372 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms