Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 INTS4P1-203ENST00000641008 3683 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 KRT8P44-201ENST00000441609 1350 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AJ011931.1-201ENST00000618749 2492 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MRPL20P1-201ENST00000400819 433 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MIR3909-201ENST00000579518 119 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MIR1199-201ENST00000621445 119 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC093458.2-201ENST00000623150 629 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms