Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 FAM220BP-201ENST00000377689 816 ntBASIC13.93□□□□□ -0.18
VRK1Q99986 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.93□□□□□ -0.18
VRK1Q99986 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.93□□□□□ -0.18
VRK1Q99986 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.93□□□□□ -0.18
VRK1Q99986 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VRK1Q99986 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 AC236430.1-201ENST00000402231 743 ntBASIC13.92□□□□□ -0.18
VRK1Q99986 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.92□□□□□ -0.18
VRK1Q99986 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK1Q99986 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK1Q99986 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.92□□□□□ -0.18
VRK1Q99986 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 AL035456.1-201ENST00000456064 1369 ntBASIC13.92□□□□□ -0.18
VRK1Q99986 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK1Q99986 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK1Q99986 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK1Q99986 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 AC092580.3-201ENST00000430932 139 ntBASIC13.91□□□□□ -0.18
VRK1Q99986 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.91□□□□□ -0.18
VRK1Q99986 TERF1P3-201ENST00000505638 1227 ntBASIC13.91□□□□□ -0.18
VRK1Q99986 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.91□□□□□ -0.18
VRK1Q99986 AC024267.1-201ENST00000582320 895 ntBASIC13.91□□□□□ -0.18
VRK1Q99986 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 AL589739.1-201ENST00000607720 493 ntBASIC13.91□□□□□ -0.18
VRK1Q99986 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms