Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 ACTG1P3-201ENST00000431775 1114 ntBASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 GAPDHP40-201ENST00000505218 1006 ntBASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDK5RAP1Q96SZ6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AC084364.1-201ENST00000551967 1556 ntBASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AP001063.1-201ENST00000568332 529 ntBASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AC107373.2-201ENST00000607735 490 ntBASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AL162274.1-201ENST00000617191 1098 ntBASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 AL645728.2-202ENST00000641679 227 ntBASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDK5RAP1Q96SZ6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 GPR53P-205ENST00000457298 1084 ntBASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 PTP4A1P2-201ENST00000546033 454 ntBASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 AC025181.2-201ENST00000606994 802 ntBASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms