Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 HAUS4P1-201ENST00000406739 1145 ntBASIC13.95□□□□□ -0.18
RFT1Q96AA3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AC093724.1-201ENST00000448659 1027 ntBASIC13.95□□□□□ -0.18
RFT1Q96AA3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 KRT18P34-201ENST00000488218 1270 ntBASIC13.95□□□□□ -0.18
RFT1Q96AA3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 RNA5SP419-201ENST00000515908 135 ntBASIC13.95□□□□□ -0.18
RFT1Q96AA3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AC096734.2-201ENST00000562054 433 ntBASIC13.95□□□□□ -0.18
RFT1Q96AA3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 BCAR1-209ENST00000546196 1340 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 IGHV3-22-201ENST00000520721 359 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 AC023141.13-201ENST00000604991 943 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 AL078644.1-201ENST00000609881 752 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 AC092127.1-201ENST00000567093 3455 ntBASIC13.94□□□□□ -0.18
RFT1Q96AA3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFT1Q96AA3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.94□□□□□ -0.18
RFT1Q96AA3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms