Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 AC092850.2-201ENST00000623821 2697 ntBASIC16.56■□□□□ 0.24
ATP2A3Q93084 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 AC010491.1-201ENST00000563101 2797 ntBASIC16.55■□□□□ 0.24
ATP2A3Q93084 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AC025048.3-201ENST00000590609 569 ntBASIC16.55■□□□□ 0.24
ATP2A3Q93084 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AC093726.1-201ENST00000608064 963 ntBASIC16.55■□□□□ 0.24
ATP2A3Q93084 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 AC005702.4-201ENST00000618393 416 ntBASIC16.55■□□□□ 0.24
ATP2A3Q93084 MIR6752-201ENST00000618442 71 ntBASIC16.55■□□□□ 0.24
ATP2A3Q93084 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A3Q93084 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP2A3Q93084 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 ARSEP1-201ENST00000420443 635 ntBASIC16.54■□□□□ 0.24
ATP2A3Q93084 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC245100.5-201ENST00000452108 331 ntBASIC16.54■□□□□ 0.24
ATP2A3Q93084 AL589987.1-201ENST00000453380 819 ntBASIC16.54■□□□□ 0.24
ATP2A3Q93084 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 AC123567.1-201ENST00000548294 1261 ntBASIC16.54■□□□□ 0.24
ATP2A3Q93084 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 RRP7BP-205ENST00000566851 833 ntBASIC16.54■□□□□ 0.24
ATP2A3Q93084 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP2A3Q93084 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms