Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CLUHP2-201ENST00000426660 1303 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC069218.1-201ENST00000435269 762 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 AL133466.1-201ENST00000447582 150 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 MARK2P5-201ENST00000507649 634 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC138466.3-201ENST00000619983 221 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AL603764.1-201ENST00000636452 321 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 KRT8P29-201ENST00000420409 1371 ntBASIC18.69■□□□□ 0.58
SNED1Q8TER0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 HLA-K-203ENST00000430151 1046 ntBASIC18.69■□□□□ 0.58
SNED1Q8TER0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 DUX4L47-201ENST00000566374 394 ntBASIC18.69■□□□□ 0.58
SNED1Q8TER0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 AC091544.8-201ENST00000619490 361 ntBASIC18.69■□□□□ 0.58
SNED1Q8TER0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 AC100757.4-201ENST00000626934 759 ntBASIC18.69■□□□□ 0.58
SNED1Q8TER0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNED1Q8TER0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
SNED1Q8TER0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 AL596276.2-201ENST00000447525 331 ntBASIC18.68■□□□□ 0.58
SNED1Q8TER0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 AC005324.6-201ENST00000587972 613 ntBASIC18.68■□□□□ 0.58
SNED1Q8TER0 AC009955.4-201ENST00000597192 544 ntBASIC18.68■□□□□ 0.58
SNED1Q8TER0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNED1Q8TER0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNED1Q8TER0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms