Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC100850.1-201ENST00000506768 649 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 ZACNP1-201ENST00000612259 710 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC100757.4-201ENST00000626934 759 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 CICP13-201ENST00000422015 2789 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC007787.1-201ENST00000588095 1583 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AL450472.2-201ENST00000603663 1156 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 AC011840.2-201ENST00000563063 1520 ntBASIC12.74□□□□□ -0.37
VPS13CQ709C8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13CQ709C8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13CQ709C8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC114812.1-204ENST00000449669 728 ntBASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AL136309.1-201ENST00000403917 691 ntBASIC12.73□□□□□ -0.37
VPS13CQ709C8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 POU5F1P6-201ENST00000466990 990 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms