Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 DOC2GP-204ENST00000639052 2548 ntBASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC62Q6P9F0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AL162727.3-201ENST00000635661 2787 ntBASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 ACTBP11-201ENST00000436287 1126 ntBASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 AC063926.3-201ENST00000624734 5658 ntBASIC17.54■□□□□ 0.4
CCDC62Q6P9F0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 AC011270.2-201ENST00000624293 2550 ntBASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 TUBB1P2-201ENST00000422712 1306 ntBASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 TUBB1P1-201ENST00000503144 1300 ntBASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 MIR4538-201ENST00000581377 78 ntBASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms