Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 TIMM8BP1-201ENST00000452384 211 ntBASIC16.32■□□□□ 0.2
CCDC38Q502W7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 AC073389.1-201ENST00000595595 795 ntBASIC16.32■□□□□ 0.2
CCDC38Q502W7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 C20orf181-201ENST00000623918 480 ntBASIC16.32■□□□□ 0.2
CCDC38Q502W7 LINC00552-201ENST00000625151 2579 ntBASIC16.32■□□□□ 0.2
CCDC38Q502W7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC38Q502W7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC38Q502W7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SPDYE11-202ENST00000450699 704 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 AC105233.2-201ENST00000523697 349 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 AF228730.5-201ENST00000530288 346 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SPDYE9P-201ENST00000570642 692 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SPDYE10P-202ENST00000612005 668 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 SPDYE8P-202ENST00000612377 668 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 SPTSSB-204ENST00000617024 1292 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 MYO15B-237ENST00000642007 4893 ntBASIC16.31■□□□□ 0.2
CCDC38Q502W7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCDC38Q502W7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC38Q502W7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms