Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.75□□□□□ -0.21
TFF3Q07654 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 REXO1L1P-202ENST00000608646 1974 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.75□□□□□ -0.21
TFF3Q07654 GPAA1P2-201ENST00000417923 928 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 CNN2P8-201ENST00000421872 913 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.75□□□□□ -0.21
TFF3Q07654 AC022137.2-201ENST00000503482 481 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 AC026410.3-201ENST00000514280 936 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.75□□□□□ -0.21
TFF3Q07654 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TFF3Q07654 RN7SL560P-201ENST00000577943 264 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.75□□□□□ -0.21
TFF3Q07654 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.75□□□□□ -0.21
TFF3Q07654 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.75□□□□□ -0.21
TFF3Q07654 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 AC092364.2-201ENST00000596710 2692 ntBASIC13.75□□□□□ -0.21
TFF3Q07654 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TFF3Q07654 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TFF3Q07654 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 AC134407.2-201ENST00000625089 1978 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 ACKR1-201ENST00000368121 1240 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 C2orf69P2-201ENST00000562032 1123 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 AC243960.2-201ENST00000600996 747 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 AL450472.2-201ENST00000603663 1156 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 AC097359.3-201ENST00000603982 1210 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TFF3Q07654 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 AL513523.2-202ENST00000427283 2040 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
TFF3Q07654 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 AL121723.1-201ENST00000445194 1519 ntBASIC13.74□□□□□ -0.21
TFF3Q07654 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TFF3Q07654 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TFF3Q07654 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms