Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 MIR4453-201ENST00000584019 89 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 AC009093.7-201ENST00000623853 1223 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AGAP7P-201ENST00000582299 2062 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 AGAP14-201ENST00000624701 2060 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 SPDYE17-201ENST00000412399 783 ntBASIC15.12■□□□□ 0.01
HMGCS1Q01581 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 AC023141.5-201ENST00000458585 616 ntBASIC15.12■□□□□ 0.01
HMGCS1Q01581 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 AC007967.4-201ENST00000614700 386 ntBASIC15.12■□□□□ 0.01
HMGCS1Q01581 MIR6080-201ENST00000617359 66 ntBASIC15.12■□□□□ 0.01
HMGCS1Q01581 AC079781.4-201ENST00000641908 219 ntBASIC15.12■□□□□ 0.01
HMGCS1Q01581 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGCS1Q01581 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCS1Q01581 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 AC106881.1-201ENST00000605849 3329 ntBASIC15.11■□□□□ 0.01
HMGCS1Q01581 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 DNAJB3-202ENST00000449667 1266 ntBASIC15.11■□□□□ 0.01
HMGCS1Q01581 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGCS1Q01581 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCS1Q01581 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms