Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 HTR7P1-202ENST00000624664 4411 ntBASIC18.34■□□□□ 0.53
CNTNAP1P78357 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 AC005740.2-201ENST00000511085 419 ntBASIC18.34■□□□□ 0.53
CNTNAP1P78357 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.34■□□□□ 0.53
CNTNAP1P78357 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP1P78357 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTNAP1P78357 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 AC005730.2-201ENST00000564549 1184 ntBASIC18.33■□□□□ 0.53
CNTNAP1P78357 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.33■□□□□ 0.53
CNTNAP1P78357 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP1P78357 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 AC025271.4-201ENST00000621477 1726 ntBASIC18.33■□□□□ 0.52
CNTNAP1P78357 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP1P78357 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP1P78357 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC010234.1-201ENST00000494599 870 ntBASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 RN7SL48P-201ENST00000579283 293 ntBASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 AC087045.2-201ENST00000606279 1003 ntBASIC18.32■□□□□ 0.52
CNTNAP1P78357 AL805961.1-201ENST00000642026 753 ntBASIC18.32■□□□□ 0.52
CNTNAP1P78357 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP1P78357 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.32■□□□□ 0.52
CNTNAP1P78357 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP1P78357 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms