Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2D3P61077 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 AC090616.6-203ENST00000579186 1945 ntBASIC11.22□□□□□ -0.61
UBE2D3P61077 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2D3P61077 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.22□□□□□ -0.61
UBE2D3P61077 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2D3P61077 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D3P61077 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UBE2D3P61077 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D3P61077 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
UBE2D3P61077 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 REXO1L1P-202ENST00000608646 1974 ntBASIC11.21□□□□□ -0.61
UBE2D3P61077 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
UBE2D3P61077 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D3P61077 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.21□□□□□ -0.61
UBE2D3P61077 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D3P61077 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D3P61077 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D3P61077 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D3P61077 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D3P61077 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
UBE2D3P61077 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D3P61077 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D3P61077 AC092127.1-201ENST00000567093 3455 ntBASIC11.21□□□□□ -0.62
UBE2D3P61077 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D3P61077 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2D3P61077 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D3P61077 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.2□□□□□ -0.62
UBE2D3P61077 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D3P61077 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D3P61077 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms