Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 MIR1224-201ENST00000408193 85 ntBASIC12.84□□□□□ -0.35
SPCS3P61009 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SPCS3P61009 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 UNC93B7-201ENST00000509439 705 ntBASIC12.84□□□□□ -0.35
SPCS3P61009 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SPCS3P61009 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.84□□□□□ -0.35
SPCS3P61009 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.84□□□□□ -0.35
SPCS3P61009 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.84□□□□□ -0.35
SPCS3P61009 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.84□□□□□ -0.35
SPCS3P61009 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 AC024267.1-201ENST00000582320 895 ntBASIC12.84□□□□□ -0.35
SPCS3P61009 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SPCS3P61009 AC148477.8-201ENST00000624298 468 ntBASIC12.84□□□□□ -0.35
SPCS3P61009 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SPCS3P61009 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.84□□□□□ -0.35
SPCS3P61009 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.84□□□□□ -0.35
SPCS3P61009 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS3P61009 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS3P61009 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.83□□□□□ -0.35
SPCS3P61009 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
SPCS3P61009 AC041040.2-201ENST00000622926 2899 ntBASIC12.83□□□□□ -0.35
SPCS3P61009 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS3P61009 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS3P61009 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS3P61009 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.83□□□□□ -0.35
SPCS3P61009 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.83□□□□□ -0.35
SPCS3P61009 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.83□□□□□ -0.35
SPCS3P61009 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 AC011700.1-201ENST00000610409 2627 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 LINC01101-201ENST00000622953 1884 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SPCS3P61009 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
SPCS3P61009 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.83□□□□□ -0.36
SPCS3P61009 AC098831.1-202ENST00000438821 336 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 AC009947.1-201ENST00000444350 727 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 EMBP1-201ENST00000458200 901 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.83□□□□□ -0.36
SPCS3P61009 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 AL773604.1-201ENST00000617417 272 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SPCS3P61009 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SPCS3P61009 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SPCS3P61009 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.83□□□□□ -0.36
SPCS3P61009 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS3P61009 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS3P61009 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms