Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.02■□□□□ -0
VSX2P58304 AC140912.1-201ENST00000577171 1054 ntBASIC15.02■□□□□ -0
VSX2P58304 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.02■□□□□ -0
VSX2P58304 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.02■□□□□ -0
VSX2P58304 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.02■□□□□ -0
VSX2P58304 AC007431.3-201ENST00000623221 587 ntBASIC15.02■□□□□ -0
VSX2P58304 AL158212.4-201ENST00000624062 1286 ntBASIC15.02■□□□□ -0
VSX2P58304 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.02■□□□□ -0
VSX2P58304 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
VSX2P58304 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
VSX2P58304 AL365203.3-201ENST00000609742 2057 ntBASIC15.02□□□□□ -0.01
VSX2P58304 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VSX2P58304 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
VSX2P58304 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.02□□□□□ -0.01
VSX2P58304 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VSX2P58304 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.01□□□□□ -0.01
VSX2P58304 TOMM22P5-201ENST00000416399 439 ntBASIC15.01□□□□□ -0.01
VSX2P58304 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.01□□□□□ -0.01
VSX2P58304 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.01□□□□□ -0.01
VSX2P58304 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.01□□□□□ -0.01
VSX2P58304 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 AC123567.1-201ENST00000548294 1261 ntBASIC15.01□□□□□ -0.01
VSX2P58304 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.01□□□□□ -0.01
VSX2P58304 TP53TG3HP-202ENST00000569755 579 ntBASIC15.01□□□□□ -0.01
VSX2P58304 AC008494.3-201ENST00000606615 944 ntBASIC15.01□□□□□ -0.01
VSX2P58304 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.01□□□□□ -0.01
VSX2P58304 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 AC105233.6-201ENST00000642093 218 ntBASIC15.01□□□□□ -0.01
VSX2P58304 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VSX2P58304 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VSX2P58304 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VSX2P58304 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15□□□□□ -0.01
VSX2P58304 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15□□□□□ -0.01
VSX2P58304 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 AC022188.1-201ENST00000620960 1664 ntBASIC15□□□□□ -0.01
VSX2P58304 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VSX2P58304 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 DBET-201ENST00000630918 3363 ntBASIC15□□□□□ -0.01
VSX2P58304 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15□□□□□ -0.01
VSX2P58304 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15□□□□□ -0.01
VSX2P58304 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15□□□□□ -0.01
VSX2P58304 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15□□□□□ -0.01
VSX2P58304 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15□□□□□ -0.01
VSX2P58304 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
VSX2P58304 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15□□□□□ -0.01
VSX2P58304 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15□□□□□ -0.01
VSX2P58304 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15□□□□□ -0.01
VSX2P58304 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15□□□□□ -0.01
VSX2P58304 AC036164.1-201ENST00000570544 333 ntBASIC15□□□□□ -0.01
VSX2P58304 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15□□□□□ -0.01
VSX2P58304 AC025048.6-201ENST00000634326 1161 ntBASIC15□□□□□ -0.01
VSX2P58304 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms