Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.81■□□□□ 0.12
LIMK2P53671 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.81■□□□□ 0.12
LIMK2P53671 HNRNPUP1-201ENST00000554987 333 ntBASIC15.81■□□□□ 0.12
LIMK2P53671 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.81■□□□□ 0.12
LIMK2P53671 AC068418.2-201ENST00000577309 3703 ntBASIC15.81■□□□□ 0.12
LIMK2P53671 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 AC026979.3-201ENST00000607315 403 ntBASIC15.81■□□□□ 0.12
LIMK2P53671 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.81■□□□□ 0.12
LIMK2P53671 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
LIMK2P53671 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 LINC02228-204ENST00000642115 2962 ntBASIC15.81■□□□□ 0.12
LIMK2P53671 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LIMK2P53671 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.81■□□□□ 0.12
LIMK2P53671 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.8■□□□□ 0.12
LIMK2P53671 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LIMK2P53671 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LIMK2P53671 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LIMK2P53671 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.8■□□□□ 0.12
LIMK2P53671 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.8■□□□□ 0.12
LIMK2P53671 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.8■□□□□ 0.12
LIMK2P53671 AC097359.3-201ENST00000603982 1210 ntBASIC15.8■□□□□ 0.12
LIMK2P53671 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LIMK2P53671 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
LIMK2P53671 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LIMK2P53671 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LIMK2P53671 NFIC-211ENST00000641145 8399 ntBASIC15.8■□□□□ 0.12
LIMK2P53671 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIMK2P53671 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 AC022144.1-201ENST00000602255 1580 ntBASIC15.79■□□□□ 0.12
LIMK2P53671 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LIMK2P53671 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.79■□□□□ 0.12
LIMK2P53671 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.79■□□□□ 0.12
LIMK2P53671 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.79■□□□□ 0.12
LIMK2P53671 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.79■□□□□ 0.12
LIMK2P53671 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.79■□□□□ 0.12
LIMK2P53671 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.79■□□□□ 0.12
LIMK2P53671 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 AC009118.2-201ENST00000613275 655 ntBASIC15.79■□□□□ 0.12
LIMK2P53671 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LIMK2P53671 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.79■□□□□ 0.12
LIMK2P53671 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LIMK2P53671 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIMK2P53671 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
LIMK2P53671 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms