Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN4P51793 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN4P51793 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
CLCN4P51793 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN4P51793 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCN4P51793 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN4P51793 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN4P51793 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN4P51793 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN4P51793 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN4P51793 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CLCN4P51793 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN4P51793 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLCN4P51793 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 ACTBP8-201ENST00000403258 1108 ntBASIC16.35■□□□□ 0.21
CLCN4P51793 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 CD8B2-202ENST00000417670 633 ntBASIC16.35■□□□□ 0.21
CLCN4P51793 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN4P51793 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN4P51793 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN4P51793 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN4P51793 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN4P51793 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN4P51793 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 AL008638.5-201ENST00000623814 1298 ntBASIC16.35■□□□□ 0.21
CLCN4P51793 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN4P51793 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN4P51793 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLCN4P51793 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN4P51793 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN4P51793 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.34■□□□□ 0.21
CLCN4P51793 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 CALR4P-201ENST00000431943 946 ntBASIC16.34■□□□□ 0.21
CLCN4P51793 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN4P51793 HOMER2P2-201ENST00000451621 847 ntBASIC16.34■□□□□ 0.21
CLCN4P51793 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN4P51793 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 AC005695.3-201ENST00000614522 232 ntBASIC16.34■□□□□ 0.21
CLCN4P51793 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN4P51793 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLCN4P51793 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN4P51793 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms