Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LHX2P50458 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 ARSEP1-201ENST00000420443 635 ntBASIC13.91□□□□□ -0.18
LHX2P50458 AC112492.5-201ENST00000421897 457 ntBASIC13.91□□□□□ -0.18
LHX2P50458 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 SLC25A47P1-201ENST00000531577 414 ntBASIC13.91□□□□□ -0.18
LHX2P50458 PTP4A1P2-201ENST00000546033 454 ntBASIC13.91□□□□□ -0.18
LHX2P50458 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 AC009486.1-201ENST00000569860 813 ntBASIC13.91□□□□□ -0.18
LHX2P50458 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.91□□□□□ -0.18
LHX2P50458 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 BTNL10-201ENST00000595971 695 ntBASIC13.91□□□□□ -0.18
LHX2P50458 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.91□□□□□ -0.18
LHX2P50458 AL138799.1-201ENST00000448213 1675 ntBASIC13.91□□□□□ -0.18
LHX2P50458 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LHX2P50458 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LHX2P50458 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LHX2P50458 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.9□□□□□ -0.18
LHX2P50458 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LHX2P50458 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.9□□□□□ -0.18
LHX2P50458 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms