Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
GDNFP39905 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
GDNFP39905 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GDNFP39905 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
GDNFP39905 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
GDNFP39905 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
GDNFP39905 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
GDNFP39905 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 AC245100.5-201ENST00000452108 331 ntBASIC13.71□□□□□ -0.21
GDNFP39905 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.71□□□□□ -0.21
GDNFP39905 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.71□□□□□ -0.21
GDNFP39905 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.71□□□□□ -0.21
GDNFP39905 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.71□□□□□ -0.21
GDNFP39905 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 AC140113.2-201ENST00000604370 208 ntBASIC13.71□□□□□ -0.21
GDNFP39905 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.71□□□□□ -0.21
GDNFP39905 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.71□□□□□ -0.21
GDNFP39905 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDNFP39905 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.71□□□□□ -0.22
GDNFP39905 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.71□□□□□ -0.22
GDNFP39905 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDNFP39905 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDNFP39905 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDNFP39905 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 BCAR1-209ENST00000546196 1340 ntBASIC13.7□□□□□ -0.22
GDNFP39905 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.7□□□□□ -0.22
GDNFP39905 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.7□□□□□ -0.22
GDNFP39905 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms