Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SFTPDP35247 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPDP35247 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 AC114501.2-201ENST00000439631 535 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 SERBP1P5-201ENST00000510079 1181 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.22□□□□□ -0.13
SFTPDP35247 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.22□□□□□ -0.13
SFTPDP35247 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SFTPDP35247 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SFTPDP35247 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPDP35247 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPDP35247 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.21□□□□□ -0.13
SFTPDP35247 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
SFTPDP35247 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.21□□□□□ -0.13
SFTPDP35247 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 KRT18P64-201ENST00000434946 1219 ntBASIC14.21□□□□□ -0.13
SFTPDP35247 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 SLED1-202ENST00000512051 380 ntBASIC14.21□□□□□ -0.13
SFTPDP35247 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.21□□□□□ -0.13
SFTPDP35247 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 AC092364.2-202ENST00000597012 1073 ntBASIC14.21□□□□□ -0.13
SFTPDP35247 AC009118.2-201ENST00000613275 655 ntBASIC14.21□□□□□ -0.13
SFTPDP35247 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.21□□□□□ -0.13
SFTPDP35247 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SFTPDP35247 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SFTPDP35247 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SFTPDP35247 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPDP35247 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPDP35247 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPDP35247 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.21□□□□□ -0.14
SFTPDP35247 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPDP35247 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPDP35247 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPDP35247 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.21□□□□□ -0.14
SFTPDP35247 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms