Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXA6P31267 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HOXA6P31267 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXA6P31267 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXA6P31267 AF254983.2-201ENST00000612331 135 ntBASIC15.23■□□□□ 0.03
HOXA6P31267 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 AL136295.7-201ENST00000619226 1200 ntBASIC15.23■□□□□ 0.03
HOXA6P31267 AC068587.8-201ENST00000641239 219 ntBASIC15.23■□□□□ 0.03
HOXA6P31267 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 PRORSD1P-202ENST00000563365 2154 ntBASIC15.23■□□□□ 0.03
HOXA6P31267 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
HOXA6P31267 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXA6P31267 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXA6P31267 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXA6P31267 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXA6P31267 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.22■□□□□ 0.03
HOXA6P31267 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 ACTG1P2-201ENST00000415776 1125 ntBASIC15.22■□□□□ 0.03
HOXA6P31267 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 ACTG1P11-201ENST00000425411 1125 ntBASIC15.22■□□□□ 0.03
HOXA6P31267 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXA6P31267 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 SAMD11P1-201ENST00000571429 661 ntBASIC15.22■□□□□ 0.03
HOXA6P31267 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.22■□□□□ 0.03
HOXA6P31267 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HOXA6P31267 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HOXA6P31267 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXA6P31267 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HOXA6P31267 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXA6P31267 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HOXA6P31267 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXA6P31267 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
HOXA6P31267 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 AP000593.2-201ENST00000542775 1433 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXA6P31267 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 FAM58BP-201ENST00000439056 645 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 AC104073.2-201ENST00000453737 312 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 AC104784.1-201ENST00000473096 294 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 AC125604.1-201ENST00000496255 707 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXA6P31267 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXA6P31267 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXA6P31267 AL162426.1-201ENST00000624141 743 ntBASIC15.21■□□□□ 0.03
HOXA6P31267 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXA6P31267 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms