Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
EPHA3P29320 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.29■□□□□ 0.04
EPHA3P29320 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 KRT18P2-201ENST00000447938 1258 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.29■□□□□ 0.04
EPHA3P29320 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 RNA5SP410-201ENST00000516285 106 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
EPHA3P29320 RARRES2P8-201ENST00000566335 367 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.29■□□□□ 0.04
EPHA3P29320 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.29■□□□□ 0.04
EPHA3P29320 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
EPHA3P29320 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 AC004870.1-201ENST00000315132 882 ntBASIC15.28■□□□□ 0.04
EPHA3P29320 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA3P29320 AC074386.1-202ENST00000463561 864 ntBASIC15.28■□□□□ 0.04
EPHA3P29320 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA3P29320 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 AP001005.1-201ENST00000571755 1248 ntBASIC15.28■□□□□ 0.04
EPHA3P29320 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA3P29320 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA3P29320 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EPHA3P29320 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA3P29320 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA3P29320 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA3P29320 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA3P29320 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
EPHA3P29320 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms