Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
XPAP23025 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.82■□□□□ 0.12
XPAP23025 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.82■□□□□ 0.12
XPAP23025 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
XPAP23025 CHCHD2P3-201ENST00000603038 451 ntBASIC15.82■□□□□ 0.12
XPAP23025 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 CLK3P2-201ENST00000427566 1453 ntBASIC15.82■□□□□ 0.12
XPAP23025 AC138969.3-201ENST00000546612 1459 ntBASIC15.82■□□□□ 0.12
XPAP23025 AC138932.2-201ENST00000548268 1459 ntBASIC15.82■□□□□ 0.12
XPAP23025 AC126755.4-201ENST00000549796 1459 ntBASIC15.82■□□□□ 0.12
XPAP23025 AC008894.3-201ENST00000624324 3103 ntBASIC15.82■□□□□ 0.12
XPAP23025 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
XPAP23025 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
XPAP23025 AP006294.1-201ENST00000415407 339 ntBASIC15.81■□□□□ 0.12
XPAP23025 KRT18P64-201ENST00000434946 1219 ntBASIC15.81■□□□□ 0.12
XPAP23025 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.81■□□□□ 0.12
XPAP23025 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.81■□□□□ 0.12
XPAP23025 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.81■□□□□ 0.12
XPAP23025 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.81■□□□□ 0.12
XPAP23025 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XPAP23025 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.81■□□□□ 0.12
XPAP23025 AC012645.4-201ENST00000610691 1061 ntBASIC15.81■□□□□ 0.12
XPAP23025 AL158212.4-201ENST00000624062 1286 ntBASIC15.81■□□□□ 0.12
XPAP23025 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.81■□□□□ 0.12
XPAP23025 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
XPAP23025 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
XPAP23025 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
XPAP23025 AL391005.1-201ENST00000623953 2435 ntBASIC15.8■□□□□ 0.12
XPAP23025 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
XPAP23025 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 TOMM22P5-201ENST00000416399 439 ntBASIC15.8■□□□□ 0.12
XPAP23025 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 AP005018.1-201ENST00000525475 301 ntBASIC15.8■□□□□ 0.12
XPAP23025 AC005225.4-201ENST00000557330 545 ntBASIC15.8■□□□□ 0.12
XPAP23025 MIR4313-201ENST00000580760 101 ntBASIC15.8■□□□□ 0.12
XPAP23025 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.8■□□□□ 0.12
XPAP23025 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.8■□□□□ 0.12
XPAP23025 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XPAP23025 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.8■□□□□ 0.12
XPAP23025 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.8■□□□□ 0.12
XPAP23025 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms