Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.14■□□□□ 0.01
CAPN3P20807 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 AJ011931.1-201ENST00000618749 2492 ntBASIC15.14■□□□□ 0.01
CAPN3P20807 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CAPN3P20807 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN3P20807 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CAPN3P20807 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN3P20807 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CAPN3P20807 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 AL139400.1-201ENST00000366220 510 ntBASIC15.13■□□□□ 0.01
CAPN3P20807 GK-202ENST00000378941 458 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 AC004987.2-201ENST00000395959 1148 ntBASIC15.13■□□□□ 0.01
CAPN3P20807 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 AC024267.1-201ENST00000582320 895 ntBASIC15.13■□□□□ 0.01
CAPN3P20807 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 SPTSSB-204ENST00000617024 1292 ntBASIC15.13■□□□□ 0.01
CAPN3P20807 Z92544.3-201ENST00000624747 417 ntBASIC15.13■□□□□ 0.01
CAPN3P20807 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPN3P20807 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN3P20807 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN3P20807 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN3P20807 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CAPN3P20807 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CAPN3P20807 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
CAPN3P20807 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.12■□□□□ 0.01
CAPN3P20807 FAM86GP-201ENST00000448322 971 ntBASIC15.12■□□□□ 0.01
CAPN3P20807 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN3P20807 AC067863.1-201ENST00000494933 530 ntBASIC15.12■□□□□ 0.01
CAPN3P20807 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.12■□□□□ 0.01
CAPN3P20807 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.12■□□□□ 0.01
CAPN3P20807 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN3P20807 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN3P20807 AC068137.2-201ENST00000605408 478 ntBASIC15.12■□□□□ 0.01
CAPN3P20807 AC099522.2-201ENST00000607001 744 ntBASIC15.12■□□□□ 0.01
CAPN3P20807 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.12■□□□□ 0.01
CAPN3P20807 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN3P20807 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms