Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.76■□□□□ 0.59
NCLP19338 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.76■□□□□ 0.59
NCLP19338 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
NCLP19338 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
NCLP19338 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.75■□□□□ 0.59
NCLP19338 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.75■□□□□ 0.59
NCLP19338 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 AL031432.2-201ENST00000566714 459 ntBASIC18.75■□□□□ 0.59
NCLP19338 AC018845.2-201ENST00000568326 409 ntBASIC18.75■□□□□ 0.59
NCLP19338 AL928711.1-201ENST00000570165 459 ntBASIC18.75■□□□□ 0.59
NCLP19338 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.75■□□□□ 0.59
NCLP19338 AL691403.2-201ENST00000618460 490 ntBASIC18.75■□□□□ 0.59
NCLP19338 AC092865.6-201ENST00000642101 219 ntBASIC18.75■□□□□ 0.59
NCLP19338 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 CICP4-201ENST00000447359 2812 ntBASIC18.75■□□□□ 0.59
NCLP19338 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
NCLP19338 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCLP19338 AC092127.1-201ENST00000567093 3455 ntBASIC18.75■□□□□ 0.59
NCLP19338 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.74■□□□□ 0.59
NCLP19338 PMS2P4-201ENST00000412466 1052 ntBASIC18.74■□□□□ 0.59
NCLP19338 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.74■□□□□ 0.59
NCLP19338 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.74■□□□□ 0.59
NCLP19338 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.74■□□□□ 0.59
NCLP19338 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.74■□□□□ 0.59
NCLP19338 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NCLP19338 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCLP19338 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.74■□□□□ 0.59
NCLP19338 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCLP19338 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCLP19338 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NCLP19338 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCLP19338 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms