Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ATF1P18846 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
ATF1P18846 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.8□□□□□ -0.2
ATF1P18846 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.8□□□□□ -0.2
ATF1P18846 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
ATF1P18846 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.8□□□□□ -0.2
ATF1P18846 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 AC061975.2-201ENST00000581722 295 ntBASIC13.8□□□□□ -0.2
ATF1P18846 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.8□□□□□ -0.2
ATF1P18846 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.8□□□□□ -0.2
ATF1P18846 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
ATF1P18846 AC092865.6-201ENST00000642101 219 ntBASIC13.8□□□□□ -0.2
ATF1P18846 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 AKAP8P1-201ENST00000434743 1349 ntBASIC13.8□□□□□ -0.2
ATF1P18846 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 AL691432.1-201ENST00000596308 1422 ntBASIC13.8□□□□□ -0.2
ATF1P18846 AC041040.2-201ENST00000622926 2899 ntBASIC13.8□□□□□ -0.2
ATF1P18846 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
ATF1P18846 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATF1P18846 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.8□□□□□ -0.2
ATF1P18846 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.79□□□□□ -0.2
ATF1P18846 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ATF1P18846 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.79□□□□□ -0.2
ATF1P18846 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ATF1P18846 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.79□□□□□ -0.2
ATF1P18846 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.79□□□□□ -0.2
ATF1P18846 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.79□□□□□ -0.2
ATF1P18846 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.79□□□□□ -0.2
ATF1P18846 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.79□□□□□ -0.2
ATF1P18846 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.79□□□□□ -0.2
ATF1P18846 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms