Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCF4P15884 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.33■□□□□ 0.2
TCF4P15884 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TCF4P15884 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCF4P15884 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TCF4P15884 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.33■□□□□ 0.2
TCF4P15884 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.33■□□□□ 0.2
TCF4P15884 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TCF4P15884 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCF4P15884 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.33■□□□□ 0.2
TCF4P15884 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TCF4P15884 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 SERBP1P3-201ENST00000459980 809 ntBASIC16.32■□□□□ 0.2
TCF4P15884 RN7SL618P-201ENST00000477850 296 ntBASIC16.32■□□□□ 0.2
TCF4P15884 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.32■□□□□ 0.2
TCF4P15884 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.32■□□□□ 0.2
TCF4P15884 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.32■□□□□ 0.2
TCF4P15884 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TCF4P15884 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
TCF4P15884 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCF4P15884 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 AC100757.3-201ENST00000622361 1406 ntBASIC16.31■□□□□ 0.2
TCF4P15884 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TCF4P15884 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.31■□□□□ 0.2
TCF4P15884 TSSK5P-201ENST00000423978 907 ntBASIC16.31■□□□□ 0.2
TCF4P15884 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 AL590560.3-201ENST00000623350 461 ntBASIC16.31■□□□□ 0.2
TCF4P15884 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCF4P15884 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCF4P15884 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TCF4P15884 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms