Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
DEFA4P12838 AP002472.1-201ENST00000577490 586 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 AC092865.6-201ENST00000642101 219 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DEFA4P12838 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 TCAF2P1-201ENST00000291129 2421 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 AL589702.1-201ENST00000641229 1509 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
DEFA4P12838 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC023274.1-201ENST00000418278 595 ntBASIC12.81□□□□□ -0.36
DEFA4P12838 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.81□□□□□ -0.36
DEFA4P12838 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC040169.1-201ENST00000565382 521 ntBASIC12.81□□□□□ -0.36
DEFA4P12838 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC002347.1-201ENST00000569543 541 ntBASIC12.81□□□□□ -0.36
DEFA4P12838 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
DEFA4P12838 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 CICP4-201ENST00000447359 2812 ntBASIC12.81□□□□□ -0.36
DEFA4P12838 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.81□□□□□ -0.36
DEFA4P12838 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DEFA4P12838 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA4P12838 AC117489.1-201ENST00000625169 3217 ntBASIC12.81□□□□□ -0.36
DEFA4P12838 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA4P12838 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.8□□□□□ -0.36
DEFA4P12838 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms