Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDGFAP04085 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFAP04085 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDGFAP04085 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 ACTBP11-201ENST00000436287 1126 ntBASIC14.72□□□□□ -0.05
PDGFAP04085 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFAP04085 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFAP04085 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFAP04085 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFAP04085 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFAP04085 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.72□□□□□ -0.05
PDGFAP04085 AC084346.2-201ENST00000607097 949 ntBASIC14.72□□□□□ -0.05
PDGFAP04085 AL391069.4-201ENST00000609583 481 ntBASIC14.72□□□□□ -0.05
PDGFAP04085 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFAP04085 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.72□□□□□ -0.05
PDGFAP04085 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDGFAP04085 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDGFAP04085 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDGFAP04085 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.72□□□□□ -0.05
PDGFAP04085 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.72□□□□□ -0.05
PDGFAP04085 PDIA3P1-201ENST00000471856 1510 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 FO393414.2-201ENST00000405153 598 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 MIR1908-201ENST00000410394 80 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 CTBP2P5-201ENST00000454986 1264 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 RN7SL399P-201ENST00000471648 279 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 AL583810.1-201ENST00000553344 1045 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.71□□□□□ -0.05
PDGFAP04085 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.71□□□□□ -0.05
PDGFAP04085 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 AC233724.13-201ENST00000598383 410 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.71□□□□□ -0.05
PDGFAP04085 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PDGFAP04085 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 U82695.1-201ENST00000635752 1889 ntBASIC14.71□□□□□ -0.05
PDGFAP04085 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDGFAP04085 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.71□□□□□ -0.06
PDGFAP04085 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.71□□□□□ -0.06
PDGFAP04085 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms