Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 LINC02560-201ENST00000596379 459 ntBASIC16.81■□□□□ 0.28
HLA-DRAP01903 AC000095.1-201ENST00000603208 874 ntBASIC16.81■□□□□ 0.28
HLA-DRAP01903 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AC236430.1-201ENST00000402231 743 ntBASIC16.8■□□□□ 0.28
HLA-DRAP01903 AC002472.2-201ENST00000442739 958 ntBASIC16.8■□□□□ 0.28
HLA-DRAP01903 FAM207CP-201ENST00000443486 507 ntBASIC16.8■□□□□ 0.28
HLA-DRAP01903 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 RARRES2P5-201ENST00000564013 466 ntBASIC16.8■□□□□ 0.28
HLA-DRAP01903 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRAP01903 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRAP01903 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
HLA-DRAP01903 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRAP01903 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DRAP01903 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms