Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.19■□□□□ 0.34
CD4P01730 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD4P01730 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.19■□□□□ 0.34
CD4P01730 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.19■□□□□ 0.34
CD4P01730 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 AC104982.3-201ENST00000581995 514 ntBASIC17.19■□□□□ 0.34
CD4P01730 EEF1DP1-201ENST00000585891 896 ntBASIC17.19■□□□□ 0.34
CD4P01730 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 AC015818.8-201ENST00000587907 1519 ntBASIC17.19■□□□□ 0.34
CD4P01730 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.19■□□□□ 0.34
CD4P01730 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.19■□□□□ 0.34
CD4P01730 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.19■□□□□ 0.34
CD4P01730 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 KRT8P35-201ENST00000483942 1338 ntBASIC17.19■□□□□ 0.34
CD4P01730 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.19■□□□□ 0.34
CD4P01730 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CD4P01730 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
CD4P01730 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD4P01730 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CD4P01730 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CD4P01730 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CD4P01730 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 FNTAP2-201ENST00000430308 634 ntBASIC17.18■□□□□ 0.34
CD4P01730 AC005077.2-201ENST00000449786 690 ntBASIC17.18■□□□□ 0.34
CD4P01730 AL590640.2-201ENST00000457038 527 ntBASIC17.18■□□□□ 0.34
CD4P01730 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.18■□□□□ 0.34
CD4P01730 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CD4P01730 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 CYP2T1P-202ENST00000641596 2535 ntBASIC17.18■□□□□ 0.34
CD4P01730 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.18■□□□□ 0.34
CD4P01730 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD4P01730 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 AC011477.6-201ENST00000604980 1927 ntBASIC17.17■□□□□ 0.34
CD4P01730 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 AL138799.1-201ENST00000448213 1675 ntBASIC17.17■□□□□ 0.34
CD4P01730 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CD4P01730 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD4P01730 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CD4P01730 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CD4P01730 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
CD4P01730 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.17■□□□□ 0.34
CD4P01730 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.17■□□□□ 0.34
CD4P01730 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.17■□□□□ 0.34
CD4P01730 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms